Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs36093105 chr16:89723282 CA/C 3.66E-8 279 26.28 25.6 9.77 KM Plot
KIRP rs36101351 chr6:27943369 C/T 2.01E-8 288 25.62 26.4 9.77 KM Plot
KIRP rs36114385 chr16:90038369 A/G 0.000204 284 24.8 42.52 10.23 KM Plot
KIRP rs36116761 chr6:27818482 C/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs36125362 chr3:197160870 T/C 0.000134 287 24.8 26.83 19.9 KM Plot
KIRP rs36190401 chr4:81312161 A/G 4.03E-8 281 26.37 20.13 9.77 KM Plot
KIRP rs367904114 chr13:45042137 C/T 1.74E-11 284 26.18 23.1 6.17 KM Plot
KIRP rs368004823 chr6:110797426 T/G 4.3E-6 281 18.57 22.57 26.52 KM Plot
KIRP rs368123232 chr10:43519060 C/A 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs368260 chr14:97913785 G/A 2.33E-11 282 9 22.63 26.2 KM Plot
KIRP rs368471005 chr13:47038335 A/G 2.49E-5 281 25.15 29.5 25.1 KM Plot
KIRP rs369449338 chr10:88220471 CTCT/C 5.63E-8 286 26.38 22.57 9.77 KM Plot
KIRP rs370814 chr12:45338025 A/G 0.000102 289 20.27 28.17 24.67 KM Plot
KIRP rs371349195 chr7:73022933 AAG/A 2.41E-6 278 27.15 18.9 11.2 KM Plot
KIRP rs3734533 chr6:26240624 A/G 0.000158 284 25.6 25.6 20.4 KM Plot